@inproceedings{mdae26, year = {2026}, url = {https://openaccess.thecvf.com/content/CVPR2026/papers/Tu_Masked-Diffusion_Autoencoders_for_3D_Medical_Vision_Representation_Learning_CVPR_2026_paper.pdf}, author = {Tu, Jiachen and Qin, Guanghui and Zhao, Theodore Zhengde and Valanarasu, Jeya Maria Jose and Zhang, Sheng and Naumann, Tristan and Lam, Fan and Wang, Sheng and Poon, Hoifung}, booktitle = {Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition (CVPR)}, title = {Masked- for } }
@inproceedings{octomed26, year = {2026}, url = {https://openaccess.thecvf.com/content/CVPR2026/papers/Ossowski_OctoMed_Data_Recipes_for_State-of-the-Art_Multimodal_Medical_Reasoning_CVPR_2026_paper.pdf}, author = {Ossowski, Timothy and Zhang, Sheng and Liu, Qianchu and Qin, Guanghui and Tan, Reuben and Naumann, Tristan and Hu, Junjie and Poon, Hoifung}, booktitle = {Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition (CVPR)}, title = : for } }
@misc{liu2026scalingmedicalimagingreport, title={Scaling medical imaging report generation with multimodal reinforcement learning}, author={Qianchu Liu and Sheng Zhang and Guanghui Qin and Yu Gu and Ying Jin and Sam Preston and Yanbo Xu and Sid Kiblawi and Wen-wai Yim and Tim Ossowski and Tristan Naumann and Mu Wei and Hoifung Poon}, year={2026}, url={https://arxiv.org/abs/2601.17151}, }
Evaluating the robustness and readiness of large frontier models in health AI applications. Yu Gu, Jingjing Fu, Xiaodong Liu, Jeya Maria Jose Valanarasu, Noel CF Codella, Reuben Tan, Qianchu Liu, Ying Jin, Sheng Zhang, Jinyu Wang, Rui Wang, Lei Song, Guanghui Qin, Naoto Usuyama, Cliff Wong, Hao Cheng, Hohin Lee, Praneeth Sanapathi, Sarah Hilado, Tristan Naumann, Javier Alvarez-Valle, Jiang Bian, Mu Wei, Khalil Malik, Lidong Zhou, Jianfeng Gao, Eric Horvitz, Matthew P Lungren, Doug Burger, Eric Topol, Hoifung Poon, and Paul Vozila. In Nature Medicine, 2026. [paper] [arXiv] [bibtex]
@article{illusion26, year = {2026}, url = {https://doi.org/10.1038/s41591-026-04501-8}, author = {Gu, Yu and Fu, Jingjing and Liu, Xiaodong and Valanarasu, Jeya Maria Jose and Codella, Noel C. F. and Tan, Reuben and Liu, Qianchu and Jin, Ying and Zhang, Sheng and Wang, Jinyu and Wang, Rui and Song, Lei and Qin, Guanghui and Usuyama, Naoto and Wong, Cliff and Cheng, Hao and Lee, HoHin and Sanapathi, Praneeth and Hilado, Sarah and Naumann, Tristan and Alvarez-Valle, Javier and Bian, Jiang and Wei, Mu and Malik, Khalil and Zhou, Lidong and Gao, Jianfeng and Horvitz, Eric and Lungren, Matthew P. and Burger, Doug and Topol, Eric and Poon, Hoifung and Vozila, Paul}, journal = {Nature Medicine}, title = {Evaluating the Robustness and Readiness of Large Frontier Models in Health Applications} }
Ras-mediated dynamic and biphasic regulation of cell migration. Yiyan Lin, Eleana Parajón, Qinling Yuan, Siyu Ye, Guanghui Qin, Yu Deng, Jane Borleis, Ariel Koyfman, Pablo A Iglesias, Konstantinos Konstantopoulos, Douglas N Robinson, and Peter N Devreotes. In Proceedings of the National Academy of Sciences of the United States of America (PNAS), 2025. [paper] [bioRxiv] [bibtex]
@article{dynamic25, year = {2025}, url = {https://doi.org/10.1073/pnas.2503847122}, author = {Lin, Yiyan and Parajón, Eleana and Yuan, Qinling and Ye, Siyu and Qin, Guanghui and Deng, Yu and Borleis, Jane and Koyfman, Ariel and Iglesias, Pablo A and Konstantopoulos, Konstantinos and Robinson, Douglas N and Devreotes, Peter N}, journal = {Proceedings of the National Academy of Sciences of the United States of America (PNAS)}, issue = {30}, title = {Ras-mediated dynamic and biphasic regulation of cell migration}, volume = {122}, pages = {e2503847122} }
@misc{huang2025eyesextendinglargelanguage, title={Be My Eyes: Extending Large Language Models to New Modalities Through Multi-Agent Collaboration}, author={James Y. Huang and Sheng Zhang and Qianchu Liu and Guanghui Qin and Tinghui Zhu and Tristan Naumann and Muhao Chen and Hoifung Poon}, year={2025}, eprint={2511.19417}, archivePrefix={arXiv}, primaryClass={cs.CL}, url={https://arxiv.org/abs/2511.19417}, }
@misc{xreasoner25, year = {2025}, url = {https://doi.org/10.48550/arXiv.2505.03981}, author = {Liu, Qianchu and Zhang, Sheng and Qin, Guanghui and Ossowski, Timothy and Gu, Yu and Jin, Ying and Kiblawi, Sid and Preston, Sam and Wei, Mu and Vozila, Paul and Naumann, Tristan and Poon, Hoifung}, title = {X-: and } }
@misc{zhang2025medrlvremergingmedicalreasoning, title={Med-RLVR: Emerging Medical Reasoning from a 3B base model via reinforcement Learning}, author={Sheng Zhang and Qianchu Liu and Guanghui Qin and Tristan Naumann and Hoifung Poon}, year={2025}, url={https://doi.org/10.48550/arXiv.2502.19655}, }
@inproceedings{hou-etal-2025-clerc, title = "{CLERC}: A Dataset for {U}. {S}. Legal Case Retrieval and Retrieval-Augmented Analysis Generation", author = "Hou, Abe Bohan and Weller, Orion and Qin, Guanghui and Yang, Eugene and Lawrie, Dawn and Holzenberger, Nils and Blair-Stanek, Andrew and Van Durme, Benjamin", booktitle = "Findings of the Association for Computational Linguistics: NAACL 2025", year = "2025", url = "https://doi.org/10.18653/v1/2025.findings-naacl.441", pages = "7898--7913", }
@inproceedings{rosset2025researchy, title={Researchy Questions: A Dataset of Multi-Perspective, Decompositional Questions for LLM Web Agents}, author={Corby Rosset and Ho-Lam Chung and Guanghui Qin and Ethan C. Chau and Zhuo Feng and Ahmed Awadallah and Jennifer Neville and Nikhil Rao}, year={2025}, booktitle={SIGIR}, url="https://doi.org/10.1145/3726302.3730275" }
@misc{deng25frm4, year = {2025}, url = {https://doi.org/10.1101/2025.06.18.660273}, author = {Deng, Huichao and Cheng, Jinbo and Fetter, Richard D. and Qin, Guanghui and Zhang, Jianxiu and Liang, Xing and Taylor, Caitlin and Zhang, Mingjie and Wu, Xiandeng and Shen, Kang}, title = {ERM proteins regulate the shape and number of Endoplasmic Reticulum–Plasma Membrane Junctions in neurons} }
@inproceedings{star25, year = {2025}, url = {https://aclanthology.org/2025.iwslt-1.1.pdf}, author = {Tan, Weiting and Chen, Yunmo and Chen, Tongfei and Qin, Guanghui and Xu, Haoran and Zhang, Heidi C. and Van Durme, Benjamin and Koehn, Philipp}, booktitle = {International Conference on Spoken Language Translation (IWSLT)}, title = {Streaming through }, doi = "10.18653/v1/2025.iwslt-1.1", }
@misc{chari2025kvdistillnearlylosslesslearnable, title={KV-Distill: Nearly Lossless Learnable Context Compression for LLMs}, author={Vivek Chari and Guanghui Qin and Benjamin Van Durme}, year={2025}, eprint={2503.10337}, archivePrefix={arXiv}, primaryClass={cs.CL}, url={https://doi.org/10.48550/arXiv.2505.03981}, }
@inproceedings{qin-etal-2024-dodo, title = "Dodo: Dynamic Contextual Compression for Decoder-only {LM}s", author = "Qin, Guanghui and Rosset, Corby and Chau, Ethan and Rao, Nikhil and Van Durme, Benjamin", booktitle = "Proceedings of the 62nd Annual Meeting of the Association for Computational Linguistics (Volume 1: Long Papers)", year = "2024", url = "https://doi.org/10.18653/v1/2024.acl-long.536", pages = "9961--9975", }
@article {lin2024ras, author = {Lin, Yiyan and Pal, Dhiman Sankar and Banerjee, Parijat and Banerjee, Tatsat and Qin, Guanghui and Deng, Yu and Borleis, Jane and Iglesias, Pablo A. and Devreotes, Peter N.}, title = {Ras suppression potentiates rear actomyosin contractility-driven cell polarization and migration}, year = {2024}, URL = {https://doi.org/10.1038/s41556-024-01453-4}, issue = {7}, volumn = {26}, pages = {1062--1076}, journal = {Nature Cell Biology} }
@inproceedings{hou-etal-2024-lfresco, title = "L-FRESco: Factual Recall Evaluation Score for Legal Analysis Generation", author = " Hou, Abe and Jiang, Zhengping and Qin, Guanghui and Weller, Orion and Blair-Stanek, Andrew and Van Durme, Benjamin", booktitle = "Proceedings of Workshop on Generative AI and Law", year = "2024", url = "https://blog.genlaw.org/pdfs/genlaw_icml2024/102.pdf", }
@InProceedings{pmlr-v202-qin23a, title = {Nugget: Neural Agglomerative Embeddings of Text}, author = {Qin, Guanghui and Van Durme, Benjamin}, booktitle = {Proceedings of the 40th International Conference on Machine Learning}, pages = {28337--28350}, year = {2023}, editor = {Krause, Andreas and Brunskill, Emma and Cho, Kyunghyun and Engelhardt, Barbara and Sabato, Sivan and Scarlett, Jonathan}, volume = {202}, series = {Proceedings of Machine Learning Research}, publisher = {PMLR}, url = {https://proceedings.mlr.press/v202/qin23a.html}, }
@inproceedings{qin-etal-2023-nlp, title = "The {NLP} Task Effectiveness of Long-Range Transformers", author = "Qin, Guanghui and Feng, Yukun and Van Durme, Benjamin", booktitle = "Proceedings of the 17th Conference of the European Chapter of the Association for Computational Linguistics", year = "2023", address = "Dubrovnik, Croatia", publisher = "Association for Computational Linguistics", url = "https://doi.org/10.18653/v1/2023.eacl-main.273", doi = "10.18653/v1/2023.eacl-main.273", pages = "3774--3790", }
@inproceedings{qin-eisner-2021-learning, title = "Learning How to Ask: Querying {LM}s with Mixtures of Soft Prompts", author = "Qin, Guanghui and Eisner, Jason", booktitle = "Proceedings of the 2021 Conference of the North American Chapter of the Association for Computational Linguistics: Human Language Technologies", year = "2021", address = "Online", publisher = "Association for Computational Linguistics", url = "https://doi.org/10.18653/v1/2021.naacl-main.410", doi = "10.18653/v1/2021.naacl-main.410", pages = "5203--5212", }
LOME: Large Ontology Multilingual Extraction. Patrick Xia*, Guanghui Qin*, Siddharth Vashishtha, Yunmo Chen, Tongfei Chen, Chandler May, Craig Harman, Kyle Rawlins, Aaron Steven White, and Benjamin Van Durme. In Annual Conference of the European Chapter of the Association for Computational Linguistics (EACL, demo), 2021. [paper] [demo] [code] [docker] [video] [bibtex]
@inproceedings{xia-etal-2021-lome, title = "{LOME}: Large Ontology Multilingual Extraction", author = "Xia, Patrick and Qin, Guanghui and Vashishtha, Siddharth and Chen, Yunmo and Chen, Tongfei and May, Chandler and Harman, Craig and Rawlins, Kyle and White, Aaron Steven and Van Durme, Benjamin", booktitle = "Proceedings of the 16th Conference of the European Chapter of the Association for Computational Linguistics: System Demonstrations", month = apr, year = "2021", address = "Online", publisher = "Association for Computational Linguistics", url = "https://doi.org/10.18653/v1/2021.eacl-demos.19", doi = "10.18653/v1/2021.eacl-demos.19", pages = "149--159", }
@inproceedings{yarmohammadi-etal-2021-everything, title = "Everything Is All It Takes: A Multipronged Strategy for Zero-Shot Cross-Lingual Information Extraction", author = "Yarmohammadi, Mahsa and Wu, Shijie and Marone, Marc and Xu, Haoran and Ebner, Seth and Qin, Guanghui and Chen, Yunmo and Guo, Jialiang and Harman, Craig and Murray, Kenton and White, Aaron Steven and Dredze, Mark and Van Durme, Benjamin", booktitle = "Proceedings of the 2021 Conference on Empirical Methods in Natural Language Processing", url = "https://doi.org/10.18653/v1/2021.emnlp-main.149", doi = "10.18653/v1/2021.emnlp-main.149", pages = "1950--1967", }
@article{10.1162/tacl_a_00380, author = {Culkin, Ryan and Hu, J. Edward and Stengel-Eskin, Elias and Qin, Guanghui and Durme, Benjamin Van}, title = "{Iterative Paraphrastic Augmentation with Discriminative Span Alignment}", journal = {Transactions of the Association for Computational Linguistics}, volume = {9}, pages = {494-509}, year = {2021}, month = {05}, issn = {2307-387X}, doi = {10.1162/tacl_a_00380}, url = {https://doi.org/10.1162/tacl\_a\_00380}, }
@InProceedings{pmlr-v119-mei20a, title = {Neural Datalog Through Time: Informed Temporal Modeling via Logical Specification}, author = {Mei, Hongyuan and Qin, Guanghui and Xu, Minjie and Eisner, Jason}, booktitle = {Proceedings of the 37th International Conference on Machine Learning}, pages = {6808--6819}, year = {2020}, editor = {III, Hal Daumé and Singh, Aarti}, volume = {119}, series = {Proceedings of Machine Learning Research}, month = {13--18 Jul}, publisher = {PMLR}, pdf = {https://proceedings.mlr.press/v119/mei20a/mei20a.pdf}, url = {https://proceedings.mlr.press/v119/mei20a.html}, }
@inproceedings{singh-etal-2020-copynext, title = "{C}opy{N}ext: Explicit Span Copying and Alignment in Sequence to Sequence Models", author = "Singh, Abhinav and Xia, Patrick and Qin, Guanghui and Yarmohammadi, Mahsa and Van Durme, Benjamin", booktitle = "Proceedings of the Fourth Workshop on Structured Prediction for NLP", year = "2020", url = "https://doi.org/10.18653/v1/2020.spnlp-1.2", pages = "11--16", }
@inproceedings{qin-etal-2018-learning, title = "Learning Latent Semantic Annotations for Grounding Natural Language to Structured Data", author = "Qin, Guanghui and Yao, Jin-Ge and Wang, Xuening and Wang, Jinpeng and Lin, Chin-Yew", booktitle = "Proceedings of the 2018 Conference on Empirical Methods in Natural Language Processing", year = "2018", url = "https://doi.org/10.18653/v1/D18-1411", pages = "3761--3771", }
@inproceedings{dou-etal-2018-data2text, title = "{D}ata2{T}ext Studio: Automated Text Generation from Structured Data", author = "Dou, Longxu and Qin, Guanghui and Wang, Jinpeng and Yao, Jin-Ge and Lin, Chin-Yew", booktitle = "Proceedings of the 2018 Conference on Empirical Methods in Natural Language Processing: System Demonstrations", year = "2018", url = "https://doi.org/10.18653/v1/D18-2003", doi = "10.18653/v1/D18-2003", pages = "13--18", }
